Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository chewbbaca_createschema
Name: chewbbaca_createschema
Owner: iuc
Synopsis: Wrapper for chewBBACA CreateSchema.
chewBBACA is a comprehensive pipeline including a set of functions for the creation and validation of whole genome and core genome MultiLocus Sequence Typing (wg/cgMLST) schemas, providing an allele calling algorithm based on Blast Score Ratio that can be run in multiprocessor settings and a set of functions to visualize and validate allele variation in the loci. chewBBACA performs the schema creation and allele calls on complete or draft genomes.
Content homepage: https://github.com/B-UMMI/chewBBACA/tree/master
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/chewbbaca
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/chewbbaca_createschema/ae1374a5ecdf
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/chewbbaca_createschema
Type: unrestricted
Revision: 3:ae1374a5ecdf
This revision can be installed: True
Times cloned / installed: 165

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Create a gene-by-gene schema 3.3.10+galaxy0 23.0

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA