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Repository hammock

Name: hammock

Owner: hammock

Synopsis: Cluster peptide sequences

Detailed description:

Clusters large amounts of short peptide sequences and generates MSAs of resulting clusters. Details in this publication:

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4681989/

Content homepage: https://github.com/hammock-dev/hammock

Development repository: https://github.com/hammock-dev/hammock

Link to this repository: https://toolshed.g2.bx.psu.edu/view/hammock/hammock/afddbcbc8ee8

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/hammock/hammock

Type: unrestricted

Revision: 9:afddbcbc8ee8

This revision can be installed: True

Times cloned / installed: 800

Dependencies of this repository

Tool dependencies - repository tools require handling of these dependencies
Name	Version	Type
clustalomega	1.2.0	package
hhsuite	2.0.16	package
hmmer	3.1b2	package
HAMMOCK_JAR		set_environment
MATRIX_PATH		set_environment

Tool dependencies - repository tools require handling of these dependencies

Name

Version

Type

clustalomega

1.2.0

package

hhsuite

2.0.16

package

hmmer

3.1b2

package

HAMMOCK_JAR

set_environment

MATRIX_PATH

set_environment

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Hammock - cluster peptides View tool metadata	Clusters short peptide sequences	1.1.1	16.01