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Repository mmseqs2_easy_linclust_clustering

Name: mmseqs2_easy_linclust_clustering

Owner: iuc

Synopsis: Wrapper for the MMseqs2 tool suite: MMseqs2 Sequence Clustering

Detailed description:

MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets.
MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows.
The software is designed to run on multiple cores and servers and exhibits very good scalability.
MMseqs2 can run 10000 times faster than BLAST. At 100 times its speed it achieves almost the same sensitivity.
It can perform profile searches with the same sensitivity as PSI-BLAST at over 400 times its speed.

Content homepage: https://github.com/soedinglab/MMseqs2

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/mmsesq2

Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/mmseqs2_easy_linclust_clustering/b174c3405549

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mmseqs2_easy_linclust_clustering

Type: unrestricted

Revision: 2:b174c3405549

This revision can be installed: True

Times cloned / installed: 43