Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository scanpy_cluster_reduce_dimension
Name: scanpy_cluster_reduce_dimension
Owner: iuc
Synopsis: Wrapper for the scanpy tool suite: Scanpy cluster, embed
Scanpy is a scalable toolkit for analyzing single-cell gene expression data. It includes preprocessing, visualization, clustering, pseudotime and trajectory inference and differential expression testing.
Content homepage: https://scanpy.readthedocs.io
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy/
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/scanpy_cluster_reduce_dimension/b2df381a6004
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/scanpy_cluster_reduce_dimension
Type: unrestricted
Revision: 7:b2df381a6004
This revision can be installed: True
Times cloned / installed: 989

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
with scanpy 1.4.4.post1+galaxy3 19.01

Categories
Single Cell - Tools for single cell analyses
Spatial Omics - Tools for spacial omics
Transcriptomics - Tools for use in the study of Transcriptomics.