Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository samtools_view
Name: samtools_view
Owner: iuc
Synopsis: convert and filter alignments
Convert between SAM, BAM, and CRAM format and optionally filtering 
by various criteria (e.g. flags, quality) of the alignments.
Content homepage: http://www.htslib.org/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_view
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/samtools_view/b72793637686
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/samtools_view
Type: unrestricted
Revision: 9:b72793637686
This revision can be installed: True
Times cloned / installed: 7655

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
- reformat, filter, or subsample SAM, BAM or CRAM 1.9+galaxy3 16.01

Categories
SAM - Tools for manipulating alignments in the SAM format