| Nanocompore compares 2 ONT nanopore direct RNA sequencing datasets from different experimental conditions expected to have a significant impact on RNA modifications. It is recommended to have at least 2 replicates per condition. For example one can use a control condition with a significantly reduced number of modifications such as a cell line for which a modification writing enzyme was knocked-down or knocked-out. Alternatively, on a smaller scale transcripts of interests could be synthesized in-vitro. |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/nanocompore_sampcomp
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| to compare Nanopolished datasets | 1.0.0rc3.post2+galaxy0 | 16.01 | |