Repository kmerfinder
Name: kmerfinder
Owner: thanhlv
Synopsis: Species identification using kmer
kmerfinder finds the best match (species identification) to the reads in one or more fastq files or one fasta file in a (kmer) database produced using the KMA program. The method outputs the best matches, along with additional taxonomic information, if that option is selected
Content homepage: https://bitbucket.org/genomicepidemiology/kmerfinder
Development repository: https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/kmerfinder
Link to this repository: https://toolshed.g2.bx.psu.edu/view/thanhlv/kmerfinder/b868a5fd2653
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/thanhlv/kmerfinder
Type: unrestricted
Revision: 0:b868a5fd2653
This revision can be installed: True
Times cloned / installed: 93

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Species identification using kmer 3.0.2+galaxy0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis