Repository suite_snvphyl_1_2_3
Name: suite_snvphyl_1_2_3
Owner: nml
Synopsis: SNVPhyl suite defining all dependencies for SNVPhyl
Development repository: https://github.com/phac-nml/snvphyl-galaxy
Link to this repository: https://toolshed.g2.bx.psu.edu/view/nml/suite_snvphyl_1_2_3/bc72925159fc
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/nml/suite_snvphyl_1_2_3
Type: repository_suite_definition
Revision: 0:bc72925159fc
This revision can be installed: True
Times cloned / installed: 213
Dependencies of this repository

Repository dependencies - A suite of tools associated with SNVphyl pipeline
Repository regex_find_replace revision ae8c4b2488e7 owned by galaxyp
Repository freebayes revision ef2c525bd8cd owned by devteam
Repository bcftools_mpileup revision ce9396ddcb2b owned by iuc
Repository bcftools_view revision 38d75661c235 owned by iuc
Repository bcftools_call revision c37b684e7f4e owned by iuc
Repository phyml revision 2bf47d57ebb5 owned by iuc
Repository smalt revision 5ba47ab90254 owned by nml
Repository filter_vcf revision 48922d9ca355 owned by nml
Repository snv_matrix revision 4d3e3d7aa0c4 owned by nml
Repository find_repeats revision 7e6be57de1a0 owned by nml
Repository vcf2snvalignment revision d2096d0c149e owned by nml
Repository consolidate_vcfs revision 4c249c0aebad owned by nml
Repository bundle_collections revision 705ebd286b57 owned by nml
Repository verify_map revision 80b7566e62ec owned by nml
Repository filter_stats revision 2fbea749a1d1 owned by nml
Repository filter_density revision c9a43abcd993 owned by nml
Repository collapse_collections revision 90981f86000f owned by nml
Repository positions2snv_alignment revision 1cf81ca17e9d owned by nml
Repository positions2snv_invariant_alignment revision 5dc704146cc6 owned by nml

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis