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Repository hicup_mapper
Name: hicup_mapper
Owner: bgruening
Synopsis: Wrapper for the HiCUP suite tool: Hicup Mapper
A galaxy wrapper implementation of the HiCUP-Pipeline from the Bioinformatics Babraham Institute. See http://www.bioinformatics.babraham.ac.uk/projects/hicup/
Content homepage: https://www.bioinformatics.babraham.ac.uk/projects/hicup/read_the_docs/html/index.html
Development repository: https://github.com/bgruening/galaxytools/tree/master/tools/hicup
Link to this repository: https://toolshed.g2.bx.psu.edu/view/bgruening/hicup_mapper/be104dee2833
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/hicup_mapper
Type: unrestricted
Revision: 7:be104dee2833
This revision can be installed: True
Times cloned / installed: 517

Contents of this repository

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Name Description Version Minimum Galaxy Version
aligns paired reads independently to a reference genome and retains reads where both partners align. 0.9.2+galaxy0 16.01

Categories
Epigenetics - Tools for analyzing Epigenetic/Epigenomic datasets