This repository has been marked as deprecated, so some tool shed features may be restricted.
Repository vcfflatten
Name: vcfflatten
Owner: anton
Synopsis: Removes multi-allelic sites by picking the most common alternate
Removes multi-allelic sites by picking the most common alternate. Requires allele frequency specification 'AF' and use of 'G' and 'A' to specify the fields which vary according to the Allele or Genotype.
Link to this repository: https://toolshed.g2.bx.psu.edu/view/anton/vcfflatten/bfc76c3d5910
Type: unrestricted
Revision: 0:bfc76c3d5910
This revision can be installed: True
Times cloned / installed: 54
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_vcflib_8a5602bf07 revision bffe0495cd92 owned by anton

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
vcflib 8a5602bf07 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Removes multi-allelic sites by picking the most common alternate 0.0.2 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA