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Repository freyja_demix
Name: freyja_demix
Owner: iuc
Synopsis: Wrapper for the Freyja suite: Freyja: Demix
Freyja is a tool to recover relative lineage abundances from mixed SARS-CoV-2 samples from a sequencing dataset (BAM aligned to the Hu-1 reference).
Content homepage: https://github.com/andersen-lab/Freyja
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/freyja
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/freyja_demix/c5f2ce99da69
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/freyja_demix
Type: unrestricted
Revision: 3:c5f2ce99da69
This revision can be installed: True
Times cloned / installed: 230

Contents of this repository

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Name Description Version Minimum Galaxy Version
lineage abundances 1.5.2+galaxy0 21.01

Categories
Metagenomics - Tools enabling the study of metagenomes
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis