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Repository confindr
Name: confindr
Owner: estrain
Synopsis: ConFindr is a pipeline that can detect contamination in bacterial NGS data
ConFindr works by looking at rMLST genes. These 53 genes are known to be single copy and conserved across all bacteria, making them excellent markers. As they are known to be single copy (with some caveats), any sample that has multiple alleles of one or more rMLST gene is likely to be contaminated. 
Content homepage: https://lowandrew.github.io/ConFindr
Development repository: https://github.com/lowandrew/ConFindr
Link to this repository: https://toolshed.g2.bx.psu.edu/view/estrain/confindr/c8158764b7a7
Type: unrestricted
Revision: 1:c8158764b7a7
This revision can be installed: True
Times cloned / installed: 19

Contents of this repository

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Name Description Version Minimum Galaxy Version
0.1.3 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis