Clair3 is a germline small variant caller for long-reads. Clair3 makes the best of two major method categories: pileup calling handles most variant candidates with speed, and full-alignment tackles complicated candidates to maximize precision and recall. Clair3 runs fast and has superior performance, especially at lower coverage. Clair3 is simple and modular for easy deployment and integration. |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/clair3
Name | Description | Version | Minimum Galaxy Version |
---|---|---|---|
germline small variant caller for long-reads | 1.0.8+galaxy0 | 23.2 |