Galaxy |

Repository megan_daa2info

Name: megan_daa2info

Owner: iuc

Synopsis: MEGAN: Get information tool from the megan suite

Detailed description:

MEGAN Community Edition - Interactive exploration and analysis of large-scale microbiome sequencing data. MEGAN
is a tool for studying the taxonomic content of a set of DNA reads, typically collected in a metagenomics project.
In a preprocessing step, a sequence alignment of all reads against a suitable database of reference DNA or protein
sequences must be performed to produce an input file for the program. MEGAN is suitable for DNA reads (metagenome
data), RNA reads (metatranscriptome data), peptide sequences (metaproteomics data) and, using a suitable synonyms
file that maps SILVA ids to taxon ids, for 16S rRNA data (amplicon sequencing).

Content homepage: https://github.com/husonlab/megan-ce

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/megan

Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/megan_daa2info/c90a645ff6e9

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/megan_daa2info

Type: unrestricted

Revision: 2:c90a645ff6e9

This revision can be installed: True

Times cloned / installed: 113