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Repository samtools_flagstat
Name: samtools_flagstat
Owner: devteam
Synopsis: Provides simple stats on BAM files.
This tool uses the SAMtools toolkit to produce simple stats on a BAM file.
Content homepage: http://www.htslib.org/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_flagstat
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/devteam/samtools_flagstat/cc61ade70eb8
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat
Type: unrestricted
Revision: 3:cc61ade70eb8
This revision can be installed: True
Times cloned / installed: 11078

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
tabulate descriptive stats for BAM datset 2.0.1 any

Categories
SAM - Tools for manipulating alignments in the SAM format
Statistics - Tools for generating statistics