| kallisto is a program for quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment for rapidly determining the compatibility of reads with targets, without the need for alignment. |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/kallisto_pseudo
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| run pseudoalignment on RNA-Seq transcripts | 0.48.0+galaxy1 | 20.05 | |