Repository garnett_check_markers
Name: garnett_check_markers
Owner: ebi-gxa
Synopsis: Wrapper for the Garnett tool suite: Garnett - check markers
Garnett is a software package that faciliates automated cell type classification from single-cell expression data.
Development repository: https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/ebi-gxa/garnett_check_markers/ce67c5c9a56e
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/garnett_check_markers
Type: unrestricted
Revision: 2:ce67c5c9a56e
This revision can be installed: True
Times cloned / installed: 296

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Check marker file to filter out markers of suboptimal quality 0.2.8+galaxy0 18.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA
Statistics - Tools for generating statistics
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis