| ### This is the first tool in the eQTL backend pipeline:
lookup, classification, frequency, sliding window frequency, hotspots, GO enrichment Link to the workflow (for import into Galaxy): http://chewbacca.bi.up.ac.za:8080/u/nanette/w/back-end-workflow-2 The information from the Markers file and the QTL Cartographer Z file, are combined to proportionally estimate a base pair position at each “QTL Cartographer bin” (e.g. 2 cM intervals). The Lookup file can then serve as a lookup table to convert between base pair and centimorgan positions. |
hg clone https://toolshed.g2.bx.psu.edu/repos/nanettec/lookup
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| for 2cM intervals | 5.0.0 | any | |