| Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography. http://catchenlab.life.illinois.edu/stacks/ |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/stacks2_gstacks
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| Call variants, genotypes and haplotype | 2.4+galaxy0 | 18.01 | |