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Repository featurecounts
Name: featurecounts
Owner: iuc
Synopsis: featureCounts counts the number of reads aligned to defined masked regions in a reference genome
Counts reads aligned to annotated genes in a reference genome from SAM or BAM files.
Content homepage: https://subread.sourceforge.net/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/featurecounts
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/featurecounts/d417fb66494e
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/featurecounts
Type: unrestricted
Revision: 4:d417fb66494e
This revision can be installed: True
Times cloned / installed: 19591
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_subread_1_4_6_p5 revision 3645871df985 owned by iuc

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
subread 1.4.6p5 package

Contents of this repository

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Name Description Version Minimum Galaxy Version
Measure gene expression in RNA-Seq experiments from SAM or BAM files. 1.4.6.p5 any

Categories
RNA - Utilities for RNA
Transcriptomics - Tools for use in the study of Transcriptomics.
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis