KrakenTools is a suite of individual scripts designed for use with Kraken, KrakenUniq, Kraken2, and Bracken. These scripts provide users of the above classification/abundance estimation tools additional support primarily for downstream analysis of Kraken/Bracken results. |
hg clone https://toolshed.g2.bx.psu.edu/repos/jvolkening/krakentools
Name | Description | Version | Minimum Galaxy Version |
---|---|---|---|
Extract reads that were classified by the Kraken family at specified taxonomic IDs | 1.2+galaxy1 | 17.09 | |
Convert a Kraken/Kraken2 report to a Krona-compatible text file | 1.2+galaxy1 | 17.09 |