| The CTAT Genome Resource Library Data Manager facilitates the download, creation, and/or use of, within a Galaxy instance, CTAT Genome Resource Libraries. Such libraries are used by the ctat_fusion_suite of tools.
There are three basic ways to use this tool. 1) Download and Build the CTAT Genome Resource Library from the CTAT archive. 2) Build the library from source data files that are already downloaded. 3) Specify the location of an already built library. Any of these methods can incorporate or be followed by a gmap build on the library. More information about these libraries and how to build them is at: https://github.com/FusionFilter/FusionFilter/wiki The libraries downloaded by this tool are at: https://data.broadinstitute.org/Trinity/CTAT_RESOURCE_LIB |
hg clone https://toolshed.g2.bx.psu.edu/repos/trinity_ctat/ctat_genome_resource_libs_data_manager
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| Retrieve, and/or specify the location of, a CTAT Genome Resource Library. | 2.0.0 | 16.01 | |
| Name | Version | Data Tables |
|---|---|---|
| ctat_genome_resource_libs_data_manager | 0.0.1 | ctat_genome_resource_libs, ctat_cravat_tissues |