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Repository bctools_merge_pcr_duplicates
Name: bctools_merge_pcr_duplicates
Owner: iuc
Synopsis: Merge PCR duplicates tool from the bctools package
bctools is a set of tools for handling barcodes and UMIs in NGS data.

bctools can be used to merge PCR duplicates according to unique molecular barcodes (UMIs),
to extract barcodes from arbitrary positions relative to the read starts,
to clean up readthroughs into UMIs with paired-end sequencing and
handles binary barcodes as used with uvCLAP and FLASH.

License: Apache License 2.0
Content homepage: https://github.com/dmaticzka/bctools
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/bctools_merge_pcr_duplicates/daad7189e48e
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bctools_merge_pcr_duplicates
Type: unrestricted
Revision: 0:daad7189e48e
This revision can be installed: True
Times cloned / installed: 561

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
according to UMIs 0.2.1 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Transcriptomics - Tools for use in the study of Transcriptomics.