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Repository nextclade
Name: nextclade
Owner: iuc
Synopsis: Nextclade tool: Nextclade
Nextclade is a tool that identifies differences between your sequences
and a reference sequence used by Nextstrain, uses these differences to
assign your sequences to clades, and reports potential sequence quality
issues in your data. You can use the tool to analyze sequences before
you upload them to a database, or if you want to assign Nextstrain
clades to a set of sequences.
Content homepage: https://github.com/nextstrain/nextclade
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/nextclade
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/nextclade/daddf188c13f
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/nextclade
Type: unrestricted
Revision: 15:daddf188c13f
This revision can be installed: True
Times cloned / installed: 1446

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Viral genome clade assignment, mutation calling, and sequence quality checks 1.10.3+galaxy0 20.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis