The settings for name, version and type from a contained tool configuration file's requirement tag does not match the information for the following tool dependency definitions in the tool_dependencies.xml file, so these tool dependencies have no relationship with any tools within this repository.
* name: ggplot2, type: package, version: 0.9.3
* name: metilene, type: package, version: 0.2-4
Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository metilene
Name: metilene
Owner: rnateam
Synopsis: Differential DNA methylation calling
Development repository: https://github.com/bgruening/galaxytools/tree/master/tools/metilene
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/rnateam/metilene/df838db0b597
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/rnateam/metilene
Type: unrestricted
Revision: 3:df838db0b597
This revision can be installed: True
Times cloned / installed: 668
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_gnu_coreutils_8_25 revision a177f177d42f owned by iuc (prior install required)
Repository package_r_2_15_0 revision 6c34eaa82fed owned by devteam (prior install required)
Repository package_bedtools_2_24 revision 3416a1d4a582 owned by iuc
Repository package_gnu_coreutils_8_22 revision ac64dfe4b1fb owned by iuc

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
bedtools 2.24 package
ggplot2 0.9.3 package
gnu_coreutils 8.22 package
metilene 0.2-4 package
perl 5.18.1 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
calling differentially methylated regions from bisulfite sequencing data 0.2.6.0 any

Categories
RNA - Utilities for RNA
Statistics - Tools for generating statistics