UShER toolkit The UShER toolkit includes a set of tools for for rapid, accurate placement of samples to existing phylogenies. While not restricted to SARS-CoV-2 phylogenetic analyses, it has enabled real-time phylogenetic analyses and genomic contact tracing in that its placement is orders of magnitude faster and more memory-efficient than previous methods. |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/usher_matutils
Name | Description | Version | Minimum Galaxy Version |
---|---|---|---|
analyze, edit, and manipulate mutation annotated tree files | 0.2.1+galaxy0 | 20.01 |