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Repository wtdbg
Name: wtdbg
Owner: bgruening
Synopsis: WTDBG tool: WTDBG2
WTDBG is a fuzzy Bruijn graph (FBG) approach to long noisy reads assembly.
A challenge in assembling long noisy reads from third generation sequencing (TGS) is reducing its requirement of computing resource, especially for large genomes. To address this issue, I developed a novel sequence alignment algorithm and a new assembly graph for efficiently assembling large genomes using TGS data.
Content homepage: https://github.com/ruanjue/wtdbg2
Development repository: https://github.com/bgruening/galaxytools/tree/master/tools/wtdbg
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/bgruening/wtdbg/e100f3f4d80e
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/wtdbg
Type: unrestricted
Revision: 1:e100f3f4d80e
This revision can be installed: True
Times cloned / installed: 351

Contents of this repository

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Name Description Version Minimum Galaxy Version
De novo assembler AND consensuser for long noisy sequences 2.0 16.01