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Repository quantification
Name: quantification
Owner: perssond
Synopsis: Module for single-cell data extraction given a segmentation mask and multi-channel image
Module for single-cell data extraction given a segmentation mask and multi-channel image. The CSV structure is aligned with histoCAT output.
Content homepage: https://github.com/labsyspharm/quantification
Development repository: https://github.com/goeckslab/tools-mti/tree/main/tools/quantification
Link to this repository: https://toolshed.g2.bx.psu.edu/view/perssond/quantification/e11d5fafd0cc
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/perssond/quantification
Type: unrestricted
Revision: 6:e11d5fafd0cc
This revision can be installed: True
Times cloned / installed: 363

Contents of this repository

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Name Description Version Minimum Galaxy Version
a module for single-cell data extraction 1.6.0+galaxy0 19.01

Categories
Imaging - Utilities to support imaging