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Repository metaphlan2_hutlab
Name: metaphlan2_hutlab
Owner: george-weingart
Synopsis: MetaPhlAn2 Huttenhower Lab: Computational tool for profiling the composition of microbial communities
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun sequencing data with species level resolution. From version 2.0, MetaPhlAn is also able to identify specific strains (in the not-so-frequent cases in which the sample contains a previously sequenced strains) and to track strains across samples for all species.
Link to this repository: https://toolshed.g2.bx.psu.edu/view/george-weingart/metaphlan2_hutlab/e2de1c761341
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/george-weingart/metaphlan2_hutlab
Type: unrestricted
Revision: 14:e2de1c761341
This revision can be installed: True
Times cloned / installed: 316
Dependencies of this repository

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
METAPHLAN2_PATH set_environment

Contents of this repository

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Name Description Version Minimum Galaxy Version
metagenomic profiler V2 2.5.0 any

Categories
Metagenomics - Tools enabling the study of metagenomes