The Ensembl Variant Effect Predictor (VEP) is able to determine the effect of variants (e.g. SNPs, insertions or deletions) on genes, transcripts, protein sequences and regulatory regions. Given the coordinates and nucleotide changes of a variant, it outputs affected genes, the exact location and consequences of the variant as well as known variants matching this one. |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/ensembl_vep
Name | Description | Version | Minimum Galaxy Version |
---|---|---|---|
with VEP | 112.0+galaxy0 | 16.01 |