Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository deg_annotate
Name: deg_annotate
Owner: iuc
Synopsis: Annotate DESeq2/DEXSeq output tables
This tool appends the output table of DESeq2 or DEXSeq with gene symbols, biotypes, positions etc. The information
you want to add is configurable. This information should present in the input GTF/GFF file as attributes of feature
you choose.
Content homepage: https://github.com/galaxyproject/tools-iuc/tree/master/tools/deg_annotate
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/deg_annotate
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/deg_annotate/e81fbbea6e8f
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/deg_annotate
Type: unrestricted
Revision: 2:e81fbbea6e8f
This revision can be installed: True
Times cloned / installed: 727

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Append annotation from GTF to differential expression tool outputs 1.1.0+galaxy1 23.0

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
Single Cell - Tools for single cell analyses