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Repository chewbbaca_nsstats
Name: chewbbaca_nsstats
Owner: iuc
Synopsis: Wrapper for chewBBACA NSStats.
chewBBACA is a comprehensive pipeline including a set of functions for the creation and validation of whole genome and core genome MultiLocus Sequence Typing (wg/cgMLST) schemas, providing an allele calling algorithm based on Blast Score Ratio that can be run in multiprocessor settings and a set of functions to visualize and validate allele variation in the loci. chewBBACA performs the schema creation and allele calls on complete or draft genomes.
Content homepage: https://github.com/B-UMMI/chewBBACA/tree/master
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/chewbbaca
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/chewbbaca_nsstats/ebbbb3265867
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/chewbbaca_nsstats
Type: unrestricted
Revision: 0:ebbbb3265867
This revision can be installed: True
Times cloned / installed: 38

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Retrieve basic information about the species and schemas in Chewie-NS 3.3.3+galaxy0 22.05

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA