Repository lastz_paired_reads
Name: lastz_paired_reads
Owner: devteam
Synopsis: Galaxy wrapper for the Lastz alignment tool on paired reads
LASTZ is a program for aligning DNA sequences, a pairwise aligner.
Originally designed to handle sequences the size of human chromosomes and from different
species, it is also useful for sequences produced by NGS sequencing technologies
such as Roche 454.
Development repository: https://github.com/galaxyproject/tools-devteam/tree/master/tools/lastz_paired_reads
Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/lastz_paired_reads/ecc974513241
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/lastz_paired_reads
Type: unrestricted
Revision: 3:ecc974513241
This revision can be installed: True
Times cloned / installed: 2444
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_lastz_1_02_00 revision 1d4a5e764543 owned by devteam

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
lastz 1.02.00 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
map short paired reads against reference sequence 1.1.1 any

Categories
Next Gen Mappers - Tools for the analysis and handling of Next Gen sequencing data