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Repository drep_compare
Name: drep_compare
Owner: iuc
Synopsis: Wrapper for the dRep application dRep compare.
dRep can rapidly and accurately compare a list of genomes in a pair-wise manner. This allows identification of groups of organisms that share similar DNA content in terms of Average Nucleotide Identity (ANI). The default options for drep dereplicate use checkm method lineage_wf that uses pplacer which can require more than 40 Gb of RAM.
Content homepage: https://github.com/MrOlm/drep
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/drep
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/drep_compare/ef1c257adcbd
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/drep_compare
Type: unrestricted
Revision: 0:ef1c257adcbd
This revision can be installed: True
Times cloned / installed: 639

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
compare a list of genomes 2.5.4.0 16.01

Categories
Metagenomics - Tools enabling the study of metagenomes