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Repository mosdepth
Name: mosdepth
Owner: iuc
Synopsis: fast and flexible BAM/CRAM depth calculation
mosdepth computes the depth of BAM/CRAM alignments with options for per-base or region based depths and flagging regions by depth thresholds
Content homepage: https://github.com/brentp/mosdepth
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/mosdepth
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/mosdepth/efd53f6ceb16
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mosdepth
Type: unrestricted
Revision: 2:efd53f6ceb16
This revision can be installed: True
Times cloned / installed: 327

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
- fast and flexible depth coverage calculation 0.3.5+galaxy0 21.05

Categories
SAM - Tools for manipulating alignments in the SAM format