Galaxy |

Repository suite_ctat_trinity_tools

Name: suite_ctat_trinity_tools

Owner: trinity_ctat

Synopsis: This is the Trinity suite of the Cancer Transcriptome Analysis Toolkit (CTAT).

Detailed description:

This is the Trinity suite of the Cancer Transcriptome Analysis Toolkit (CTAT). Trinity, developed at the Broad Institute and the Hebrew University of Jerusalem, represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data. This is CTAT's implementation of our protocol for transcriptome assembly and downstream analysis as published in Nature Protocols - http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3875132/.

Content homepage: https://github.com/NCIP/Trinity_CTAT_galaxy/wiki

Development repository: https://github.com/NCIP/Trinity_CTAT_galaxy/tree/master/suite_ctat_trinity_tools

Link to this repository: https://toolshed.g2.bx.psu.edu/view/trinity_ctat/suite_ctat_trinity_tools/f16e151f35bc

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/trinity_ctat/suite_ctat_trinity_tools

Type: repository_suite_definition

Revision: 0:f16e151f35bc

This revision can be installed: True

Times cloned / installed: 222