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Repository dexseq

Name: dexseq

Owner: iuc

Synopsis: Inference of differential exon usage in RNA-Seq

Detailed description:

Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential
expression based on a model using the negative binomial distribution

Content homepage: https://www.bioconductor.org/packages/release/bioc/html/DEXSeq.html

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/dexseq

Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/dexseq/f89c9b25feb4

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/dexseq

Type: unrestricted

Revision: 3:f89c9b25feb4

This revision can be installed: True

Times cloned / installed: 1847

Contents of this repository

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
DEXSeq View tool metadata	Determines differential exon usage from count tables	1.24.0.0	16.01
DEXSeq-Count View tool metadata	Prepare and count exon abundancies from RNA-seq data	1.24.0.0	16.01