Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository vcffixup
Name: vcffixup
Owner: devteam
Synopsis: Count the allele frequencies across alleles present in each record in the VCF file.
Uses genotypes from the VCF file to correct AC (alternate allele
count), AF (alternate allele frequency), NS (number of called), in the VCF records.
Content homepage: https://github.com/ekg/vcflib
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcffixup
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/devteam/vcffixup/fc5a64fdd5b2
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/vcffixup
Type: unrestricted
Revision: 2:fc5a64fdd5b2
This revision can be installed: True
Times cloned / installed: 3172

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Count the allele frequencies across alleles present in each record in the VCF file 1.0.0_rc1+galaxy0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA