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Repository transdecoder
Name: transdecoder
Owner: iuc
Synopsis: TransDecoder finds coding regions within transcripts
TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.
Content homepage: https://transdecoder.github.io/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/transdecoder/ffd1300599a1
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/transdecoder
Type: unrestricted
Revision: 7:ffd1300599a1
This revision can be installed: True
Times cloned / installed: 1052

Contents of this repository

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Name Description Version Minimum Galaxy Version
finds coding regions within transcripts 5.5.0+galaxy2 20.05

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA