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Repository samtools_mpileup
Owner: devteam
Synopsis: MPileup SNP and indel caller
Generate BCF or pileup for one or multiple BAM files. Alignment
records are grouped by sample identifiers in @RG header lines. If sample identifiers
are absent, each input file is regarded as one sample.
Content homepage: http://www.htslib.org/
Type: unrestricted
Revision: 5:aa0ef6f0ee89
This revision can be installed: True
Times cloned / installed: 13386
Dependencies of this repository

Repository package_ncurses_5_9 revision 335ebf512407 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)

Name Version Type
samtools 1.2 package

Contents of this repository

Name Description Version Minimum Galaxy Version
call variants 2.0 any

Categories
SAM - Tools for manipulating alignments in the SAM format