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Repository samtools_mpileup
Owner: devteam
Synopsis: MPileup SNP and indel caller
Generate BCF or pileup for one or multiple BAM files. Alignment
records are grouped by sample identifiers in @RG header lines. If sample identifiers
are absent, each input file is regarded as one sample.
Content homepage:
Type: unrestricted
Revision: 7:bfc4517aa037
This revision can be installed: True
Times cloned / installed: 13386
Dependencies of this repository

Repository package_ncurses_5_9 revision 335ebf512407 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)

Name Version Type
samtools 1.2 package

Contents of this repository

Name Description Version Minimum Galaxy Version
call variants 2.1.1 any

SAM - Tools for manipulating alignments in the SAM format