Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository lofreq_viterbi
Owner: iuc
Synopsis: Realign reads with LoFreq in Galaxy.
LoFreq is a fast and sensitive variant-caller for inferring SNVs and indels
from next-generation sequencing data. It makes full use of base-call qualities
and other sources of errors inherent in sequencing (e.g. mapping or base/indel
alignment uncertainty), which are usually ignored by other methods or only
used for filtering.
Content homepage:
Type: unrestricted
Revision: 3:dbd9f2db9ed8
This revision can be installed: True
Times cloned / installed: 3404

Contents of this repository

Name Description Version Minimum Galaxy Version
with LoFreq viterbi 2.1.4+galaxy1 16.01

Variant Analysis - Tools for single nucleotide polymorphism data such as WGA