This repository has been marked as deprecated, so some tool shed features may be restricted.
Repository busco
Name: busco
Owner: abretaud
Synopsis: BUSCO assess genome and annotation completeness
Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs
Content homepage: http://busco.ezlab.org/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/abretaud/busco/ee788a3bcdf0
Type: unrestricted
Revision: 4:ee788a3bcdf0
This revision can be installed: True
Times cloned / installed: 54
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_augustus_3_1 revision 24009970003a owned by iuc (prior install required)
Repository package_blast_plus_2_2_31 revision 921d2963a177 owned by iuc (prior install required)
Repository package_hmmer_3_1b2 revision 1c3186d91593 owned by iuc (prior install required)
Repository package_python_3_4 revision 20ecf5cd3c0e owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_readline_6_2 revision 5313ca2fbce6 owned by iuc (prior install required)
Repository package_bzlib_1_0 revision af4887e1f595 owned by iuc (prior install required)
Repository package_xz_5_0_5 revision 944f93d45594 owned by iuc (prior install required)
Repository package_sqlite_3_8_3 revision c8a5c11cc921 owned by iuc (prior install required)
Repository package_gdbm_1_11 revision ed2537bccffc owned by iuc (prior install required)
Repository package_ncurses_5_9 revision 335ebf512407 owned by iuc (prior install required)
Repository package_ncurses_5_9 revision 335ebf512407 owned by iuc (prior install required)
Repository package_libtool_2_4 revision 7f67694b167c owned by iuc (prior install required)
Repository package_augustus_3_1 revision 24009970003a owned by iuc (prior install required)
Repository package_blast_plus_2_2_31 revision 921d2963a177 owned by iuc (prior install required)
Repository package_hmmer_3_1b2 revision 1c3186d91593 owned by iuc (prior install required)

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
augustus 3.1 package
blast+ 2.2.31 package
busco 1.1b1 package
hmmer 3.1b2 package
python 3.4 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
assess genome assembly and annotation completeness 1.1b1 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis