Repository bioconductor_scp
Name: bioconductor_scp
Owner: recetox
Synopsis: scp is a package for the single cell proteomics data processing.
scp is an R package for the analysis of mass spectrometry-based single cell proteomics data. It builds on the QFeatures package and allows aggregation to peptide or protein level, data transformation such as log2 transformation or normalization, batch correction and imputation of missing values. It also provides several quality control metrics.
Content homepage: https://uclouvain-cbio.github.io/scp/index.html
Development repository: https://github.com/RECETOX/galaxytools/tree/master/tools/bioconductor-scp
Link to this repository: https://toolshed.g2.bx.psu.edu/view/recetox/bioconductor_scp/cd2f3a280463
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/recetox/bioconductor_scp
Type: unrestricted
Revision: 0:cd2f3a280463
This revision can be installed: True
Times cloned / installed: 54

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
single cell proteomics data analysis workflow 1.16.0+galaxy0 23.0

Categories
Proteomics - Tools enabling the study of proteins
Single Cell - Tools for single cell analyses