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Repository lordec
Name: lordec
Owner: cmonjeau
Synopsis: Colibread / Lordec
LoRDEC is a program to correct sequencing errors in long reads from 3rd generation sequencing with high error rate, and is especially intended for PacBio reads
Type: unrestricted
Revision: 9:d8a196d257fd
This revision can be installed: True
Times cloned / installed: 88
Dependencies of this repository

Repository ziptool revision e466f86a4520 owned by cmonjeau
Repository decompress_an_archive_and_merge revision 78d968479d52 owned by cmonjeau
Repository archive_datatypes revision ddf34b1d55c8 owned by cmonjeau
Repository archive_datatypes revision ddf34b1d55c8 owned by cmonjeau
Repository package_lordec_0_6 revision dca7b4c855e5 owned by abretaud (prior install required)

Name Version Type
lordec 0.6 package

Contents of this repository

Name Description Version Minimum Galaxy Version
is an efficient tool for correcting sequencing errors in PacBio reads 0.6 any
is an efficient tool to trim weak regions of PacBio corrected reads 0.6 any
is an efficient tool to generate statistics on solid and weak k-mers in PacBio corrected reads 0.6 any
is an efficient tool to generate de Bruijn graph from PacBio corrected reads 0.6 any

Categories
Fastq Manipulation - Tools for manipulating fastq data
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis