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Repository samtools_depth
Name: samtools_depth
Owner: iuc
Synopsis: Computes the depth at each position or region
Computes the depth at each position or region of a sequence for a given alignment file
Content homepage: https://www.htslib.org/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_depth
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/samtools_depth/56faa6a57e50
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/samtools_depth
Type: unrestricted
Revision: 3:56faa6a57e50
This revision can be installed: True
Times cloned / installed: 1066

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
compute the depth at each position or region 1.15.1+galaxy0 20.05

Categories
SAM - Tools for manipulating alignments in the SAM format