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Repository peptideshaker
Name: peptideshaker
Owner: galaxyp
Synopsis: PeptideShaker and SearchGUI
Runs multiple search engines (X! Tandem, OMSSA and MS-GF+) on any number of MGF peak lists using the SearchGUI application and combines the results.

https://code.google.com/p/peptide-shaker/
Content homepage: http://compomics.github.io
Development repository: https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker
Link to this repository: https://toolshed.g2.bx.psu.edu/view/galaxyp/peptideshaker/3ec27b4cee7c
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/peptideshaker
Type: unrestricted
Revision: 61:3ec27b4cee7c
This revision can be installed: True
Times cloned / installed: 2285

Contents of this repository

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Name Description Version Minimum Galaxy Version
Perform protein identification using various search engines and prepare results for input to Peptide Shaker 4.0.41+galaxy1 20.01
Sets the identification parameters to be used in SearchGUI and PeptideShaker apps 4.0.41+galaxy1 20.01
Perform protein identification using various search engines based on results from SearchGUI 2.0.33+galaxy1 20.01
Appends decoy sequences to FASTA files 4.0.41+galaxy1 20.01

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA