Repository trinity_psc
Name: trinity_psc
Owner: nate
Synopsis: Trinity for large shared memory systems at the Pittsburgh Supercomputing Center
This repository provides a modified version of the Trinity wrapper from Brian Haas, as used on the Galaxy public server at usegalaxy.org. It relies on versions of Trinity and other dependencies available through the modules system on the large shared memory system, Bridges, at the Pittsburgh Supercomputing Center. This is not designed to be a generally consumable version of the Trinity tool but may be useful as a reference.
Content homepage: http://trinityrnaseq.github.io/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/nate/trinity_psc/1de64ac61b4e
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/nate/trinity_psc
Type: unrestricted
Revision: 5:1de64ac61b4e
This revision can be installed: True
Times cloned / installed: 435

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
(Beta) De novo assembly of RNA-Seq data Using Trinity on PSC's Bridges 0.0.1 any

Categories
Assembly - Tools for working with assemblies