FROGS is a galaxy/CLI workflow designed to produce an OTU count matrix
from high depth sequencing amplicon data. This workflow is focused on: - User-friendliness with the integration in galaxy and lots of rich graphic outputs - Accuracy with a clustering without global similarity threshold, the management of multi-affiliations and management of separated PCRs in the chimera removal step - Speed with fast algorithms and an easy to use parallelisation - Scalability with algorithms designed to support the data growth |
hg clone https://toolshed.g2.bx.psu.edu/repos/maille/affiliation_otu