Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository gsc_filter_cells
Name: gsc_filter_cells
Owner: artbio
Synopsis: Filter single cell RNAseq data on libray depth and number of detected genes
Filter single cell RNAseq datasets on 
- Absolute numbers of aligned reads or of detected genes
and / or
- relatively to percentile threshold in the datasets, for numbers of aligned reads or of detected genes
Content homepage: http://artbio.fr
Development repository: https://github.com/ARTbio/tools-artbio/tree/master/tools/gsc_filter_cells
Link to this repository: https://toolshed.g2.bx.psu.edu/view/artbio/gsc_filter_cells/47cf889595ec
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/artbio/gsc_filter_cells
Type: unrestricted
Revision: 2:47cf889595ec
This revision can be installed: True
Times cloned / installed: 107

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
on total aligned reads and/or number of detected genes 0.9.2 16.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.